jigcell.compare.transform
Class ExtremaTestTransform

java.lang.Object
  javax.swing.TransferHandler
      jigcell.compare.impl.Transferer
          jigcell.compare.impl.DataSource
              jigcell.compare.data.DataGenerator
                  jigcell.compare.data.EditableDataGenerator
                      jigcell.compare.data.ProgrammableDataGenerator
                          jigcell.compare.transform.Transform
                              jigcell.compare.transform.ExtremaTestTransform

All Implemented Interfaces:

java.awt.datatransfer.Transferable, java.beans.PropertyChangeListener, java.io.Serializable, java.lang.Cloneable, java.util.EventListener, IDataGenerator, IDataSource, IEditableDataGenerator, IProgrammableDataGenerator, IReadableDataSource, IWriteableDataSource, ITransform

public class ExtremaTestTransform
extends Transform

A transform that tests whether a sequence would be passed by a band-pass filter.

This code is licensed under the DARPA BioCOMP Open Source License. See LICENSE for more details.

Author:

Nicholas Allen

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class jigcell.compare.data.EditableDataGenerator

EditableDataGenerator.EditableDataGeneratorDelegate

Nested classes/interfaces inherited from interface jigcell.compare.IDataSource

IDataSource.Option

Field Summary

static java.lang.String	ATTRIBUTE_MAXIMUM Attribute for the maximum value this transform lets through
static java.lang.String	ATTRIBUTE_MINIMUM Attribute for the minimum value this transform lets through
protected static IDataElement	FALSE False value
protected static java.lang.String	NAME_TRANSFORM Display name for this transform
protected static IDataElement	TRUE True value

Fields inherited from class jigcell.compare.transform.Transform

allowContextInsertion, allowContextRemoval, container, context

Fields inherited from class jigcell.compare.data.ProgrammableDataGenerator

allowDescriptionQuery, callStack, listenerList

Fields inherited from class jigcell.compare.data.DataGenerator

COMPARATOR_NAME, DESCRIPTION_READ, SEPARATOR_ESCAPE, SPECIAL_CHARS

Fields inherited from class jigcell.compare.impl.DataSource

OPTIONS_LOCK, SEPARATOR_PAIR, SEPARATOR_PART, SEPARATORS

Fields inherited from class jigcell.compare.impl.Transferer

CSV_FOOTER, CSV_LINEPOSTPEND, CSV_LINEPREPEND, CSV_LINESEPARATOR, HTML_FOOTER, HTML_HEADPOSTPEND, HTML_HEADPREPEND, HTML_HEADSEPARATOR, HTML_LINEPOSTPEND, HTML_LINEPREPEND, HTML_LINESEPARATOR

Fields inherited from class javax.swing.TransferHandler

COPY, COPY_OR_MOVE, MOVE, NONE

Fields inherited from interface jigcell.compare.transform.ITransform

OPTION_ANNOTATION, OPTION_COMPATIBLE, OPTION_NEXTSTATEMENT, OPTION_PREVIOUSSTATEMENT, OPTION_TRANSFORM, PROPERTY_TRANSFORM_EDIT, RESOURCE_TRANSFORMS

Fields inherited from interface jigcell.compare.IProgrammableDataGenerator

METHOD_GENERATE, OPTION_COMPARE, OPTION_INPUTTYPECHECKER, OPTION_OUTPUTTYPECHECKER

Fields inherited from interface jigcell.compare.IDataGenerator

ATTRIBUTE_COMMENT, ATTRIBUTE_GUID, PROPERTY_GENERATOR_EDIT, RESOURCE_GENERATORS

Fields inherited from interface jigcell.compare.IReadableDataSource

OPTION_READDESCRIPTION, OPTION_READICON

Fields inherited from interface jigcell.compare.IDataSource

OPTION_NAME

Fields inherited from interface jigcell.compare.IWriteableDataSource

OPTION_WRITEDESCRIPTION, OPTION_WRITEICON

Constructor Summary

ExtremaTestTransform()
Creates a new transform for range testing.

Method Summary

protected IDataElement	evaluate(IDataElement input) Evaluates the transform.
ITransformAnnotation	getAnnotation() An annotation object for this generator.
static java.lang.Object	getCustomizableInstances() Generates an instance.
java.lang.String	getMaximum() The maximum.
java.lang.String	getMinimum() The minimum.
void	setMaximum(java.lang.String maximum) Sets the maximum.
void	setMinimum(java.lang.String minimum) Sets the minimum.

Methods inherited from class jigcell.compare.transform.Transform

clear, copy, evaluate, flush, getAllowContextInsertion, getAllowContextRemoval, getCompatibleTransforms, getContainer, getDependencies, getEvaluationContext, getNextStatement, getPreviousElement, getPreviousStatement, getSource, getTransformForGenerator, hasNextStatement, hasPreviousStatement, initializeSource, isReorderable, isRunnable, setAllowContextInsertion, setAllowContextRemoval, setAnnotation, setCompatibleTransforms, setContainer, setEvaluationContext, setNextStatement, setPreviousStatement

Methods inherited from class jigcell.compare.data.ProgrammableDataGenerator

addEvaluationListener, createCustomizer, fireEvaluationError, fireEvaluationError, fireEvaluationStart, fireEvaluationStop, getAllowDescriptionQuery, getCallStack, getElement, getElement, getEvaluationLock, getInputTypeChecker, getInterface, getOutputTypeChecker, isCached, peekElement, peekInterface, propertyChange, removeEvaluationListener, setAllowDescriptionQuery, setInputTypeChecker, setInterfaceClass, setOutputTypeChecker, updateInterface

Methods inherited from class jigcell.compare.data.EditableDataGenerator

getPredictedCompatibility, getPredictedCompatibility, isSet, setAttribute, setComment, setElement, setElement, setOption, setState, write

Methods inherited from class jigcell.compare.data.DataGenerator

clone, compareByName, copy, generateGUID, getAttribute, getComment, getCopiedFrom, getName, getPredictedContents, getTransferData, isCopy, isCopyRelated, read, setCopyName, setName, toString

Methods inherited from class jigcell.compare.impl.DataSource

addOption, addPropertyChangeListener, addPropertyChangeListener, configure, getOption, getOptions, getOptionType, getPropertyChangeListeners, getPropertyChangeListeners, getReadDescriptionOption, getReadIconOption, getState, getWriteDescriptionOption, getWriteIconOption, persistSource, removePropertyChangeListener, removePropertyChangeListener, setOptions, setOptionType, setReadDescriptionOption, setReadIconOption, setWriteDescriptionOption, setWriteIconOption, unpersistSource

Methods inherited from class jigcell.compare.impl.Transferer

addExtension, addFlavor, createCSVTable, createFormattedTable, createHTMLTable, getExceptionRecorder, getExpectedClasses, getExpectedClasses, getExpectedClasses, getFlavors, getFlavors, getPreferredExtensions, getPreferredExtensions, getTransferClass, getTransferDataFlavors, getTransferFlavor, isDataFlavorSupported, transfer

Methods inherited from class javax.swing.TransferHandler

canImport, createTransferable, exportAsDrag, exportDone, exportToClipboard, getCopyAction, getCutAction, getPasteAction, getSourceActions, getVisualRepresentation, importData

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface jigcell.compare.IProgrammableDataGenerator

addEvaluationListener, getCallStack, getElement, getEvaluationLock, getInputTypeChecker, getInterface, getOutputTypeChecker, peekElement, removeEvaluationListener

Methods inherited from interface jigcell.compare.IEditableDataGenerator

setComment, setCopyName, setElement, setName

Methods inherited from interface jigcell.compare.IDataGenerator

copy, getAttribute, getComment, getCopiedFrom, getElement, isCached, isCopy, isCopyRelated, setAttribute

Methods inherited from interface jigcell.compare.IReadableDataSource

getPredictedContents, getReadDescriptionOption, getReadIconOption, read, setReadDescriptionOption, setReadIconOption

Methods inherited from interface jigcell.compare.IDataSource

addOption, clone, configure, getName, getOption, getState, setOption, setState

Methods inherited from interface java.awt.datatransfer.Transferable

getTransferData, getTransferDataFlavors, isDataFlavorSupported

Methods inherited from interface jigcell.compare.IWriteableDataSource

getPredictedCompatibility, getPredictedCompatibility, getWriteDescriptionOption, getWriteIconOption, setWriteDescriptionOption, setWriteIconOption, write

Field Detail

ATTRIBUTE_MAXIMUM

public static final java.lang.String ATTRIBUTE_MAXIMUM

Attribute for the maximum value this transform lets through

See Also:

Constant Field Values

ATTRIBUTE_MINIMUM

public static final java.lang.String ATTRIBUTE_MINIMUM

Attribute for the minimum value this transform lets through

See Also:

Constant Field Values

TRUE

protected static final IDataElement TRUE

True value

FALSE

protected static final IDataElement FALSE

False value

NAME_TRANSFORM

protected static final java.lang.String NAME_TRANSFORM

Display name for this transform

See Also:

Constant Field Values

Constructor Detail

ExtremaTestTransform

public ExtremaTestTransform()

Creates a new transform for range testing.

Method Detail

getCustomizableInstances

public static java.lang.Object getCustomizableInstances()

Generates an instance.

getAnnotation

public ITransformAnnotation getAnnotation()

An annotation object for this generator.

Specified by:

getAnnotation in interface ITransform

Overrides:

getAnnotation in class Transform

getMaximum

public java.lang.String getMaximum()

The maximum.

getMinimum

public java.lang.String getMinimum()

The minimum.

setMaximum

public void setMaximum(java.lang.String maximum)

Sets the maximum.

Parameters:

maximum - Maximum

setMinimum

public void setMinimum(java.lang.String minimum)

Sets the minimum.

Parameters:

minimum - Minimum

evaluate

protected IDataElement evaluate(IDataElement input)

Evaluates the transform.

Overrides:

evaluate in class Transform

Parameters:

input - Transform input