jigcell.compare.tests
Class TransformBenchmark

java.lang.Object
  jigcell.compare.tests.Benchmark
      jigcell.compare.tests.TransformBenchmark

All Implemented Interfaces:

java.beans.PropertyChangeListener, java.util.EventListener

public class TransformBenchmark
extends Benchmark
implements java.beans.PropertyChangeListener

A collection of tests for evaluating transform loading performance.

This code is licensed under the DARPA BioCOMP Open Source License. See LICENSE for more details.

Author:

Nicholas Allen

Field Summary

protected IDataEditorTab	experimentView View to load experimental data in
protected IDataGenerator	result Record of loading results
protected FileDataSource	source Source to load from
protected EditableSeriesView	transformView View to load transforms in

Fields inherited from class jigcell.compare.tests.Benchmark

benchmarkRunnable, compare

Constructor Summary

TransformBenchmark(Compare compare)
Creates a new tester for transform loading performance.

Method Summary

double	benchmark(int size) Runs a benchmark that loads an experiment file then loads a transform file.
double	benchmarkAddRow(int size) Runs a benchmark that loads an experiment file, adds a new row, saves the experiment file, loads a transform file, adds a new transform, and saves the transform file.
static IDataGeneratorMap	generateData(int size) Generates some transforms.
static ITransform	generateTransform(int seed) Generates a new transform.
void	propertyChange(java.beans.PropertyChangeEvent e)
IDataGenerator	runBenchmark() Runs a collection of benchmarks for loading transform files.
protected void	runOffEventThread() Performs the tester computations that do not interact with the interface.
protected void	runOnEventThread(int state) Performs an operation that interacts with the interface.
static void	test(Compare compare) Runs a loading benchmark.

Methods inherited from class jigcell.compare.tests.Benchmark

createBenchmarkReport, currentTime, loadInView, reset, runState, timeRunState

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

transformView

protected EditableSeriesView transformView

View to load transforms in

source

protected FileDataSource source

Source to load from

experimentView

protected IDataEditorTab experimentView

View to load experimental data in

result

protected IDataGenerator result

Record of loading results

Constructor Detail

TransformBenchmark

public TransformBenchmark(Compare compare)

Creates a new tester for transform loading performance.

Parameters:

compare - Comparator to abuse

Method Detail

generateData

public static IDataGeneratorMap generateData(int size)

Generates some transforms. The transforms match up with the experiments generated by ExperimentPerformanceTester.

Parameters:

size - Number of transforms to create

generateTransform

public static ITransform generateTransform(int seed)

Generates a new transform.

Parameters:

seed - Number used to create unique data

test

public static void test(Compare compare)

Runs a loading benchmark.

Parameters:

compare - Comparator to abuse

benchmark

public double benchmark(int size)
                 throws java.lang.Exception

Runs a benchmark that loads an experiment file then loads a transform file.

Parameters:

size - Size of experiment and transform files

Throws:

java.lang.Exception

benchmarkAddRow

public double benchmarkAddRow(int size)
                       throws java.lang.Exception

Runs a benchmark that loads an experiment file, adds a new row, saves the experiment file, loads a transform file, adds a new transform, and saves the transform file.

Parameters:

size - Size of experiment and transform files

Throws:

java.lang.Exception

propertyChange

public void propertyChange(java.beans.PropertyChangeEvent e)

Specified by:

propertyChange in interface java.beans.PropertyChangeListener

runBenchmark

public IDataGenerator runBenchmark()
                            throws java.lang.Exception

Runs a collection of benchmarks for loading transform files.

Throws:

java.lang.Exception

runOffEventThread

protected void runOffEventThread()
                          throws java.lang.Exception

Performs the tester computations that do not interact with the interface. This method will be called at the start of the test.

Specified by:

runOffEventThread in class Benchmark

Throws:

java.lang.Exception

runOnEventThread

protected void runOnEventThread(int state)
                         throws java.lang.Exception

Performs an operation that interacts with the interface. After the operation completes, the thread needs to notify the benchmark.

Specified by:

runOnEventThread in class Benchmark

Parameters:

state - Indicates which interface operation is next

Throws:

java.lang.Exception