jigcell.compare.cellcycle
Class GenericPhenotypeInterface

java.lang.Object
  jigcell.compare.ui.CustomizableInterface
      jigcell.compare.objectiveui.ObjectiveInterface
          jigcell.compare.cellcycle.GenericPhenotypeInterface

All Implemented Interfaces:

java.awt.event.MouseListener, java.util.EventListener, ICustomizableInterface

Direct Known Subclasses:

BuddingYeastPhenotypeInterface

public class GenericPhenotypeInterface
extends ObjectiveInterface

Interface for a GenericPhenotypeObjective.

This code is licensed under the DARPA BioCOMP Open Source License. See LICENSE for more details.

Author:

Nicholas Allen

Field Summary

protected GenericPhenotypeObjective	generator Generator
protected static java.lang.String	LABEL_SCALECYCLE Label for scale of cycle count
protected static java.lang.String	LABEL_SCALEG1 Label for scale of G1 length
protected static java.lang.String	LABEL_SCALEMASS Label for scale of division mass
protected static java.lang.String	LABEL_SCALESUBCYCLE Label for scale of subcycle count
protected static java.lang.String	LABEL_WEIGHTCYCLE Label for weight of cycle count
protected static java.lang.String	LABEL_WEIGHTG1 Label for weight of G1 length
protected static java.lang.String	LABEL_WEIGHTMASS Label for weight of mass of division
protected static java.lang.String	LABEL_WEIGHTSTAGE Label for weight of arrest stage
protected static java.lang.String	LABEL_WEIGHTSUBCYCLE Label for weight of subcycle count
protected static java.lang.String	LABEL_WEIGHTTYPE Label for weight of arrest type
protected static java.lang.String	LABEL_WEIGHTVIABILITY Label for weight of viability

Fields inherited from class jigcell.compare.ui.CustomizableInterface

customizers, DESCRIPTION_INPUT, DESCRIPTION_OUTPUT, LOCK_CUSTOMIZERS, manager, menuManager, multipleViewSupport, PATH_DESCRIPTION_INPUT, PATH_DESCRIPTION_OUTPUT, PATH_HELP, popup, POPUP_DEFAULT, PROPERTY_CUSTOMIZERNAME

Fields inherited from interface jigcell.compare.ICustomizableInterface

DIMENSION_HELP, OPTION_INPUTDESCRIPTION, OPTION_OUTPUTDESCRIPTION

Constructor Summary

GenericPhenotypeInterface(IProgrammableDataGenerator generator)
Creates a new interface for a GenericPhenotypeObjective.

Method Summary

protected void	addGeneratorControl(java.lang.String label, double value) Adds a new control value to the interface.
protected javax.swing.JComponent	createCustomizer() Generates a new customizer for the generator.

Methods inherited from class jigcell.compare.objectiveui.ObjectiveInterface

createCustomizer, destroyCustomizer

Methods inherited from class jigcell.compare.ui.CustomizableInterface

createPopup, decorateCustomizer, getCompare, getInputDescription, getOutputDescription, hasMultipleViewSupport, mouseClicked, mouseEntered, mouseExited, mousePressed, mouseReleased, setInputDescription, setMultipleViewSupport, setOutputDescription, updateInterface

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

LABEL_SCALECYCLE

protected static final java.lang.String LABEL_SCALECYCLE

Label for scale of cycle count

See Also:

Constant Field Values

LABEL_SCALEMASS

protected static final java.lang.String LABEL_SCALEMASS

Label for scale of division mass

See Also:

Constant Field Values

LABEL_SCALEG1

protected static final java.lang.String LABEL_SCALEG1

Label for scale of G1 length

See Also:

Constant Field Values

LABEL_SCALESUBCYCLE

protected static final java.lang.String LABEL_SCALESUBCYCLE

Label for scale of subcycle count

See Also:

Constant Field Values

LABEL_WEIGHTCYCLE

protected static final java.lang.String LABEL_WEIGHTCYCLE

Label for weight of cycle count

See Also:

Constant Field Values

LABEL_WEIGHTMASS

protected static final java.lang.String LABEL_WEIGHTMASS

Label for weight of mass of division

See Also:

Constant Field Values

LABEL_WEIGHTG1

protected static final java.lang.String LABEL_WEIGHTG1

Label for weight of G1 length

See Also:

Constant Field Values

LABEL_WEIGHTSTAGE

protected static final java.lang.String LABEL_WEIGHTSTAGE

Label for weight of arrest stage

See Also:

Constant Field Values

LABEL_WEIGHTSUBCYCLE

protected static final java.lang.String LABEL_WEIGHTSUBCYCLE

Label for weight of subcycle count

See Also:

Constant Field Values

LABEL_WEIGHTTYPE

protected static final java.lang.String LABEL_WEIGHTTYPE

Label for weight of arrest type

See Also:

Constant Field Values

LABEL_WEIGHTVIABILITY

protected static final java.lang.String LABEL_WEIGHTVIABILITY

Label for weight of viability

See Also:

Constant Field Values

generator

protected GenericPhenotypeObjective generator

Generator

Constructor Detail

GenericPhenotypeInterface

public GenericPhenotypeInterface(IProgrammableDataGenerator generator)

Creates a new interface for a GenericPhenotypeObjective.

Parameters:

generator - Generator

Method Detail

addGeneratorControl

protected void addGeneratorControl(java.lang.String label,
                                   double value)

Adds a new control value to the interface.

Parameters:

label - Text label for control

value - Initial value for control

createCustomizer

protected javax.swing.JComponent createCustomizer()

Generates a new customizer for the generator.

Specified by:

createCustomizer in class CustomizableInterface